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Delete get_data.py

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HarshitGupta11 2019-07-24 15:55:55 +05:30 committed by GitHub
parent 6387abb6a4
commit 45a736d9df
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1 changed files with 0 additions and 50 deletions
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get_data.py
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@ -1,50 +0,0 @@
import sys
import os
from req_data import get_data_file,download_data
from read_data import read_data_genome,read_data_homology
from process_data import list_dict_genomes
def get_data_genome(arg,dir,a,d,ld,ldg):
if arg[0]=='-d':
if arg[4]=="-r":
c=0
else:
return a,d,ld,ldg
elif arg[0]=='-f':
get_data_file(arg[1],dir)
elif arg[0]=="-nd":
return ld,ldg,a,d
if arg[4]=="-r":
a,d=read_data_genome(dir,a,d)
assert(len(a)==len(d))
ld,ldg=list_dict_genomes(a,d)
assert(len(ld)==len(ldg))
for i in range(len(ld)):
assert(len(ld[i])==len(ldg[i]))
return ld,ldg,a,d
def get_data_homology(arg,dir,a_h,d_h):
if arg[2]=="-l":
if not os.path.exists(dir):
os.mkdir(dir)
download_data(arg[3],dir)
elif arg[2]=="-f":
get_data_file(arg[3],dir)
elif arg[2]=="-d":
if arg[4]=="-r":
c=0
else:
return a_h,d_h
elif arg[2]=="-nd":
return a_h,d_h
if arg[4]=="-r":
a_h,d_h=read_data_homology(dir,a_h,d_h)
assert(len(a_h)==len(d_h))
return a_h,d_h