priyatham/compara-deep-learning
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HarshitGupta11 2019-06-19 20:43:22 +05:30 committed by GitHub
parent 3013f3a11d
commit de9f568bd6
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1 changed files with 15 additions and 5 deletions
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18
test_model.py
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@ -3,12 +3,14 @@ import numpy as np
import pandas as pd
import requests
import sys
import pickle
from get_data import get_data_genome
from process_data import get_nearest_neighbors
from create_synteny_matrix import create_synteny_matrix_mul
from ete3 import Tree
import traceback
"""
arg=sys.argv
arg=arg[1:]
@ -24,7 +26,18 @@ if len(arg)!=5:
sys.exit(1)
dir_g="data"
cmap,cimap,ld,ldg,a,d=get_data_genome(arg,dir_g)
cmap,cimap,ld,ldg,a,d=get_data_genome(arg,dir_g)"""
data={}
with open("genome_maps","rb") as file:
data=pickle.load(file)
cmap=data["cmap"]
cimap=data["cimap"]
ld=data["ld"]
ldg=data["ldg"]
a=data["a"]
d=data["d"]
n=3
server = "https://rest.ensembl.org"
@ -166,6 +179,3 @@ with tf.Session() as sess:
print("Some Error Was There Try Again:(",e)
traceback.print_exc()
continue