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Update prepare_synteny_matrix.py

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HarshitGupta11 2019-06-10 22:10:09 +05:30 committed by GitHub
parent 6f5219a123
commit d7f6ccf87c
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1 changed files with 2 additions and 2 deletions
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prepare_synteny_matrix.py
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@ -29,14 +29,14 @@ print("Neighbor Genes Loaded")
if enable_break==1: if enable_break==1:
gene_sequences=read_gene_sequences(a_h,lsy,"geneseq","gene_sequences") gene_sequences=read_gene_sequences(a_h,lsy,"geneseq","gene_sequences")
else: else:
gene_sequences=read_gene_sequences(a_h[0],lsy,"geneseq","gene_sequences") gene_sequences=read_gene_sequences(a_h,lsy,"geneseq","gene_sequences")
print("Gene Sequences Loaded") print("Gene Sequences Loaded")
if enable_break==1: if enable_break==1:
save_after=10 save_after=10
else: else:
save_after=250000 save_after=500000
n=3 n=3
c=0 c=0
j=0 j=0