2019-05-11 11:22:42 -07:00
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import sys
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from get_data import get_data_homology,get_data_genome
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2019-05-13 10:53:31 -07:00
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from process_data import create_data_homology_ls
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2019-05-11 11:22:42 -07:00
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arg=sys.argv
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arg=arg[1:]
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if len(arg)!=5:
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print("No. of arguments more or less. Please check")
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sys.exit(1)
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a=[]
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d={}
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a_h=[]
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d_h={}
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ld=[]
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ldg=[]
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dir_g="data"
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ld,ldg,a,d=get_data_genome(arg,dir_g,a,d,ld,ldg)
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2019-05-13 10:53:31 -07:00
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#print(a[0][0:10],"\n",d,"\n",ld[0][0:10],"\n")
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2019-05-11 11:22:42 -07:00
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dir_hom="data_homology"
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a_h,d_h=get_data_homology(arg,dir_hom,a_h,d_h)
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#print(a_h[0][0:10],"\n",d_h)
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2019-05-13 10:53:31 -07:00
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n=2 #no. of numbers neighbors
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lsy,lcmap=create_data_homology_ls(a_h,d_h,n,a,d,ld,ldg)
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"""
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print(lsy,"\n",lcmap)
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lt=ldg[0]
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for x in lsy:
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xr=lsy[x]['f']
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xl=lsy[x]['b']
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for g in range(len(xl)-1,-1,-1):
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print(a[0].iloc[lt[xl[g]],[3,4]])
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print("------------------\n",a[0].iloc[lt[x],[3,4]],"\n-------------------")
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for g in xr:
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print(a[0].iloc[lt[g],[3,4]])"""
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